DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4270 and scl-18

DIOPT Version :9

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:124 Identity:35/124 - (28%)
Similarity:50/124 - (40%) Gaps:24/124 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NAALNKLAQEWANHLRDQNTMAHRPNPKYGENIF-----LSGGMDVTGDLPVEMWYREINS--YD 111
            ||.|.:.|..:|    .:|...|...|..|||:|     ..|..:..|.:....|.:|...  :|
 Worm    77 NATLERSAYSFA----QKNPSQHSFIPDIGENLFWHWSTRPGDFNKYGPMAALSWIKEFREKFWD 137

  Fly   112 FN---KAQFVPTAGHFTQLIWKSSVEMGSGVA----------RKADRTWVVCNYNPPGN 157
            .|   ...|....||.||::|..:.:||..|:          |...:..|||:|.|.||
 Worm   138 SNILTNDLFGSGVGHATQMVWADTYQMGCAVSHFKEIHKRTGRPITKICVVCHYWPKGN 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 SCP_GAPR-1_like 31..158 CDD:240182 35/124 (28%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 32/119 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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