DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4270 and scl-26

DIOPT Version :10

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_504963.1 Gene:scl-26 / 183662 WormBaseID:WBGene00016821 Length:208 Species:Caenorhabditis elegans


Alignment Length:174 Identity:38/174 - (21%)
Similarity:60/174 - (34%) Gaps:42/174 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VAPIPKTHERPPGPRGQDTKGNNELFLKEVFNTTNKYR--------AMHGCPAVTINAAL---NK 59
            |.....|||.            ||..::.:....||.|        |.|.....|....|   |.
 Worm    13 VGSFASTHEW------------NETAIEGLVFVHNKLRNDASQGLWARHNISKSTDMQKLFWNNS 65

  Fly    60 LAQEWANHLRDQNTMAHRPNPKYGENIFLSGGMDVT--GDLPVEMWYREIN--SYDFNKAQFVPT 120
            |..|..:.:.|.:.:..| ....||||:   ..|||  .|:..:.....||  |:|...::....
 Worm    66 LVAEAKHEMYDCDQLEKR-ELTLGENIY---QYDVTTYDDVDGQQGEAAINKDSHDALSSKDQAA 126

  Fly   121 AGHFTQLIWKSSVEMGSGVARKADR----------TWVVCNYNP 154
            .....|:::..|..:|. :....||          .:::|.|:|
 Worm   127 QYRLRQILYSKSNSIGC-IYESCDRIDDEGTNYNTRFIICKYSP 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 CAP_GAPR1-like 31..158 CDD:349401 32/149 (21%)
scl-26NP_504963.1 CAP_euk 30..168 CDD:349399 30/142 (21%)

Return to query results.
Submit another query.