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Protein Alignment CG4270 and vap-2
DIOPT Version :9
Sequence 1: | NP_608663.1 |
Gene: | CG4270 / 33408 |
FlyBaseID: | FBgn0031407 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001300377.1 |
Gene: | vap-2 / 181273 |
WormBaseID: | WBGene00011462 |
Length: | 507 |
Species: | Caenorhabditis elegans |
Alignment Length: | 122 |
Identity: | 34/122 - (27%) |
Similarity: | 55/122 - (45%) |
Gaps: | 30/122 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 LNKLAQEWANHLRDQNTMAHRPNPKYGENIFLSGGMDVTGDLP-------VEMWYREINSYDF-- 112
|.:.||.|||:....:: ||...|..|:|:::| ..:...| ||.|::|:..:..
Worm 359 LERFAQNWANNCVFAHS-AHYERPNQGQNLYMS---SFSNPDPRSLIHTAVEKWWQELEEFGTPI 419
Fly 113 ------------NKAQFVPTAGHFTQLIWKSSVEMGSGVARKADRTWVVCNYNPPGN 157
.|| .||:||:.|..:..:|.|:|.....::|||:|.|.||
Worm 420 DNVLTPELWDLKGKA-----IGHYTQMAWDRTYRLGCGIANCPKMSYVVCHYGPAGN 471
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG4270 | NP_608663.1 |
SCP_GAPR-1_like |
31..158 |
CDD:240182 |
34/122 (28%) |
vap-2 | NP_001300377.1 |
SCP |
104..253 |
CDD:214553 |
|
SCP |
315..468 |
CDD:214553 |
31/117 (26%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X35 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.820 |
|
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