DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4270 and scl-2

DIOPT Version :9

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_502503.1 Gene:scl-2 / 178251 WormBaseID:WBGene00009895 Length:207 Species:Caenorhabditis elegans


Alignment Length:161 Identity:36/161 - (22%)
Similarity:54/161 - (33%) Gaps:46/161 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QDTKGNNELFLK---EVFNTTNKYRAMHGCPAVTINAALNKLAQEWANHLRDQNTMAHRPNPKYG 83
            |.:.|.|.|.:|   .|..:...|  .:|||.                        .|..:...|
 Worm    48 QKSPGTNLLKMKWDSAVAASAQNY--ANGCPT------------------------GHSGDAGLG 86

  Fly    84 ENIF------LSGGMDVTGDLPVEMWYREINSYDFNK-----AQFVPTAGHFTQLIWKSSVEMGS 137
            ||::      ..|.::..|......|.:|...|.:..     ..|....||.||:.|..|..:|.
 Worm    87 ENLYWYWTSGSLGDLNQYGSAASASWEKEFQDYGWKSNLMTIDLFNTGIGHATQMAWAKSNLIGC 151

  Fly   138 GV------ARKADRTWVVCNYNPPGNVVGLF 162
            ||      :...::..|||.|.|.||.:..:
 Worm   152 GVKDCGRDSNGLNKVTVVCQYKPQGNFINQY 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 SCP_GAPR-1_like 31..158 CDD:240182 31/146 (21%)
scl-2NP_502503.1 SCP 21..174 CDD:214553 33/151 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161822
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.