DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4270 and LOC100536500

DIOPT Version :9

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_017207056.1 Gene:LOC100536500 / 100536500 -ID:- Length:245 Species:Danio rerio


Alignment Length:151 Identity:41/151 - (27%)
Similarity:70/151 - (46%) Gaps:27/151 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KEVFNTTNKYRAMHGCPAVTINAALNKLAQEWANHLRD-------QNTMAHRP-------NPKYG 83
            :|:.:..|.:|.     ||..:|: |.|...|::.:.:       :..|.|.|       ..:.|
Zfish    41 QEIVDVHNAFRR-----AVQPSAS-NMLKMSWSDAVAESARGWINKCNMTHGPPSSRMLNGYEMG 99

  Fly    84 ENIFLSGGMDVTGDLPVEMWYREINSYDFNKAQFVPTA-GHFTQLIWKSSVEMGSGVARKADRTW 147
            ||:|.:.|:.....: |:.|:.|:|:|.:........| ||:||::|.||.|:|..|.:.....:
Zfish   100 ENLFKATGISSWTSV-VDAWHSEVNNYKYPIGSINGQATGHYTQVVWYSSYEVGCAVTQCGSNYF 163

  Fly   148 VVCNYNPPGNVVGLFKDNVPP 168
            ..|:|...||    |: .|||
Zfish   164 YGCHYYRAGN----FR-TVPP 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 SCP_GAPR-1_like 31..158 CDD:240182 36/139 (26%)
LOC100536500XP_017207056.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.