DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4270 and r3hdml

DIOPT Version :10

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:153 Identity:46/153 - (30%)
Similarity:66/153 - (43%) Gaps:40/153 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NKYRAMHGCPAVTI-----NAALNKLAQEWANHLRDQNTMAHRPNP--KY-GENIFL-SGGMDVT 95
            |:.|:....||..:     :..|.|.|:.|||    |....|.||.  :| |:|:.: ||.....
 Frog    71 NQVRSKVFPPAANMEYMVWDERLAKSAESWAN----QCKWDHGPNQLMRYIGQNLSVHSGRYRSI 131

  Fly    96 GDLPVEMWYREINSYDF-----------NKAQFVPTAGHFTQLIWKSSVEMGSGVA--------- 140
            .|| |:.||.|...|.|           ||.... ...|:||::|.||..:|..|.         
 Frog   132 VDL-VKGWYDERQHYSFPHPRECNPSCPNKCTGA-VCTHYTQMVWASSNRIGCAVNICTNINVWG 194

  Fly   141 ---RKADRTWVVCNYNPPGNVVG 160
               |:|  :::||||:..||.:|
 Frog   195 STWRQA--SYLVCNYSIKGNWIG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 CAP_GAPR1-like 31..158 CDD:349401 44/149 (30%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 42/144 (29%)

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