DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and ctrb.2

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001038747.1 Gene:ctrb.2 / 692313 ZFINID:ZDB-GENE-060519-7 Length:263 Species:Danio rerio


Alignment Length:241 Identity:81/241 - (33%)
Similarity:118/241 - (48%) Gaps:25/241 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PVVPVLLEPSERIIGGSSMDITDVPWQVSLQ-YYGEHFCGGSIYSKTIIITAAHCIKEGERSIRA 81
            |.:|.::....||:.|........||||||| ..|.||||||:.::..::|||||.......:..
Zfish    22 PAIPPVITGYARIVNGEEAVPHSWPWQVSLQDSTGFHFCGGSLINEWWVVTAAHCNVRTSHRVIL 86

  Fly    82 GSSLHDSGGVVVGVEAYII-----HPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDP--P 139
            |.  ||.......::...:     ||.|:...:.||:.::||::|...:..:..:.||||:.  |
Zfish    87 GE--HDRSSNAESIQTMTVGKVFKHPNFNMFTINNDILLIKLATPAKINTHVSPVCLAETNDNFP 149

  Fly   140 TSSSALATGWG--RGNFLIRPRQLQGVEILIRPLIV---CKLKYGNGVFNEDICAGRMGKGGCYG 199
            .....:.:|||  :.|....|..||...:   ||:.   ||..:||.:.:..:|||..|...|.|
Zfish   150 GGMKCVTSGWGLTKHNAPDTPALLQQAAL---PLLTNEDCKRFWGNKITDLMVCAGASGASSCMG 211

  Fly   200 DSGGPLVFNGQ----LVGITSRTGNIVCLGSS--LYASVARYRNWI 239
            |||||||....    ||||.| .|:.||..||  :||.|.:.|.|:
Zfish   212 DSGGPLVCQKDGVWTLVGIVS-WGSSVCSPSSPGVYARVTKLRAWV 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 78/228 (34%)
ctrb.2NP_001038747.1 Tryp_SPc 34..259 CDD:238113 78/229 (34%)

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