DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:247 Identity:82/247 - (33%)
Similarity:112/247 - (45%) Gaps:54/247 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKE-----------GERSIRA 81
            ||||||:..:..|.|||||||....|.|||::.|...::|||||.:.           |..:|  
  Rat   184 ERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHCFRSYSNPQQWTATFGVSTI-- 246

  Fly    82 GSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTI--PLAETDPPTSSSA 144
                  |..:.|.|.|.:.|.:::....:||:||::|..|::|:.:|..:  |.|..:....|.|
  Rat   247 ------SPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPAATQNIIPDSVA 305

  Fly   145 LATGWGR----GNFLIRPRQLQGVEILIRPLIVCK--LKYGNGVFNEDICAG-RMGK-GGCYGDS 201
            ..||||.    ||.:   ..||..|:.|....||.  ..||..|....:||| |.|. ..|.|||
  Rat   306 YVTGWGSLTYGGNTV---TNLQQGEVRIVSSEVCNEPAGYGGSVLPGMLCAGVRSGAVDACQGDS 367

  Fly   202 GGPLVFN--------------GQLVGITSRTGNIVCLGSSLYASVARYRNWI 239
            |||||..              |...|:.::.|        :|..|..|||||
  Rat   368 GGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPG--------VYTRVTAYRNWI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 79/244 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 80/245 (33%)
Blue background indicates that the domain is not in the aligned region.

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