DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG17234

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_722785.1 Gene:CG17234 / 59225 FlyBaseID:FBgn0042187 Length:251 Species:Drosophila melanogaster


Alignment Length:259 Identity:118/259 - (45%)
Similarity:159/259 - (61%) Gaps:28/259 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSKCFHLLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTII 65
            ||.:.|.||||:..|.:..|.   ...:|||||..:.|..|||||||||:|:|.|||||||:.||
  Fly     1 MFIESFLLLLALDFLSAGQVN---RWEQRIIGGEPIGIEQVPWQVSLQYFGDHVCGGSIYSENII 62

  Fly    66 ITAAHCI--KEGER------SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPL 122
            :|||||.  :||.|      .:||||:|.||.|.:|.|.|.|||.::......||:|:::||:||
  Fly    63 VTAAHCFFDEEGNRLDDQGYQVRAGSALTDSNGTLVDVAALIIHEEYAFDLNINDIAIVRLSTPL 127

  Fly   123 SFSDSIQTIPLAETDPPTSSSALATGWGRGNFL-----IRPRQLQGVEILIRPLIVCKLKYGNGV 182
            .|:..:|.||||:|:|...|.||.:|||....|     :.|..|||:.:.|:.:..|:|      
  Fly   128 EFTSKVQPIPLAKTNPYPRSIALVSGWGVSYILNDSTNLYPTHLQGLALHIKSIFSCRL------ 186

  Fly   183 FNED-ICAGRMGKGGCYGDSGGPLVFNGQLVGITS--RTGNIVCLGSSLYASVARYRNWILSAI 243
            |:.. :|||..|:..|:||||||||.|.||||:.|  |.|   |:.|:.:.||..:|.|||:||
  Fly   187 FDPSLLCAGTYGRTACHGDSGGPLVVNKQLVGVVSWGRKG---CVSSAFFVSVPYFREWILNAI 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 104/225 (46%)
Tryp_SPc 30..239 CDD:238113 103/224 (46%)
CG17234NP_722785.1 Tryp_SPc 26..243 CDD:214473 104/225 (46%)
Tryp_SPc 27..243 CDD:238113 103/224 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443131
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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