DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG34458

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001097340.1 Gene:CG34458 / 5740868 FlyBaseID:FBgn0085487 Length:257 Species:Drosophila melanogaster


Alignment Length:242 Identity:81/242 - (33%)
Similarity:129/242 - (53%) Gaps:13/242 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCI 72
            |||||..:.|.:.   :....|||||........|.|||||..|.|.||||:.|.|:|:|||||.
  Fly    13 LLLAVTFVHSDMD---VAEESRIIGGQFAAPGQFPHQVSLQLNGRHHCGGSLISDTMIVTAAHCT 74

  Fly    73 ---KEGE-RSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPL 133
               ..|: ::|...:.|....|....:..:||||:::..:.:.|::::|||||:....::|||.|
  Fly    75 MGQNPGQMKAIVGTNDLSAGNGQTFNIAQFIIHPRYNPQSQDFDMSLIKLSSPVPMGGAVQTIQL 139

  Fly   134 AETDP--PTSSSALATGWGRGNFLIR-PRQLQGVEILIRPLIVCKLKYGNGVFNEDICAGR-MGK 194
            |::|.  ...:.|:.:|:|..|..:: |.:|:..::.:.....|..:...|:.:..:|||. .|:
  Fly   140 ADSDSNYAADTMAMISGFGAINQNLQLPNRLKFAQVQLWSRDYCNSQNIPGLTDRMVCAGHPSGQ 204

  Fly   195 -GGCYGDSGGPLVFNGQLVGITSRTGNIVCLG-SSLYASVARYRNWI 239
             ..|.|||||||..:|:|.|:.|........| .::|..|...|:||
  Fly   205 VSSCQGDSGGPLTVDGKLFGVVSWGFGCGAKGRPAMYTYVGALRSWI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 73/219 (33%)
Tryp_SPc 30..239 CDD:238113 72/218 (33%)
CG34458NP_001097340.1 Tryp_SPc 31..251 CDD:214473 73/219 (33%)
Tryp_SPc 32..254 CDD:238113 74/220 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452422
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.750

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