DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and TMPRSS4

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_005271670.1 Gene:TMPRSS4 / 56649 HGNCID:11878 Length:494 Species:Homo sapiens


Alignment Length:236 Identity:73/236 - (30%)
Similarity:114/236 - (48%) Gaps:35/236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEG----ERSIRAGSSLHDSG 89
            |::|.....:...|||||:||..:|.|||||.....::|||||.::.    ...:||||....|.
Human   204 RVVGVEEASVDSWPWQVSIQYDKQHVCGGSILDPHWVLTAAHCFRKHTDVFNWKVRAGSDKLGSF 268

  Fly    90 GVVVGVEAYII--HPQFDKHNMENDVAVLKLSSPLSFSDSIQTI--PLAETDPPTSSSALATGWG 150
            ..:...:..||  :|.:.|   :||:|::||..||:||.:::.|  |..:.:...::.....|||
Human   269 PSLAVAKIIIIEFNPMYPK---DNDIALMKLQFPLTFSGTVRPICLPFFDEELTPATPLWIIGWG 330

  Fly   151 --------RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDICAGRMGKGG---CYGDSGGP 204
                    ..:.|::    ..|:::..........|...|..:.:||| :.:||   |.||||||
Human   331 FTKQNGGKMSDILLQ----ASVQVIDSTRCNADDAYQGEVTEKMMCAG-IPEGGVDTCQGDSGGP 390

  Fly   205 LVFNG---QLVGITSRTGNIVCLGSS---LYASVARYRNWI 239
            |::..   .:|||.|  ....|.|.|   :|..|:.|.|||
Human   391 LMYQSDQWHVVGIVS--WGYGCGGPSTPGVYTKVSAYLNWI 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 71/234 (30%)
TMPRSS4XP_005271670.1 LDLa 58..92 CDD:238060
SRCR_2 108..197 CDD:470597
Tryp_SPc 204..429 CDD:214473 71/234 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.