DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and zgc:112038

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001018482.1 Gene:zgc:112038 / 553673 ZFINID:ZDB-GENE-050522-271 Length:311 Species:Danio rerio


Alignment Length:244 Identity:71/244 - (29%)
Similarity:112/244 - (45%) Gaps:45/244 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GGSSMDITDVPWQVSLQYYG--EHFCGGSIYSKTIIITAAHC----------IKEGERSIRAGSS 84
            ||........|||.|:....  :|.||||:.:|..:::||||          |..| |..:.||:
Zfish    37 GGDDAVAGSWPWQASIHRISPEDHICGGSLINKDWVLSAAHCFMITATANIKIFLG-RQFQTGSN 100

  Fly    85 LHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDP--PTSSSALAT 147
            .::....:..:   :|||.:......||:|:|:|||.::|:|.|:.:.||..|.  ...:.:..|
Zfish   101 PNEISRTLTQI---VIHPDYSTTTQNNDIALLRLSSSVTFTDYIRPVCLASADSVFAGGTKSWIT 162

  Fly   148 GWG--RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDICAG--RMGKGGCYGDSGGPLVFN 208
            ||.  |.:.:.....||.|::.:.....|...|...:.:..||||  ..||..|.||||||:|  
Zfish   163 GWDKHRSSDIQVTNVLQEVQLPVVSNTECNADYKGIITDNMICAGINEGGKDACQGDSGGPMV-- 225

  Fly   209 GQLVGITSRTGN------IVCLG--------SSLYASVARYRNWILSAI 243
                   |:.|:      ||..|        ..:|..|::|::||.|.:
Zfish   226 -------SQNGSRWIQSGIVSFGRECGLPRYPGIYTRVSQYQSWITSEL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 68/238 (29%)
zgc:112038NP_001018482.1 Tryp_SPc 37..263 CDD:238113 68/238 (29%)

Return to query results.
Submit another query.