DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC548809

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 XenbaseID:XB-GENE-29098979 Length:334 Species:Xenopus tropicalis


Alignment Length:262 Identity:83/262 - (31%)
Similarity:129/262 - (49%) Gaps:52/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIK----EGER 77
            ||:|      |.||:||:.......|||:||:|.|.|.||||:.|...|:|||||.:    ..:.
 Frog    51 SPLV------SSRIVGGTDATNGAWPWQISLRYKGSHICGGSVISNQWIMTAAHCFEYSRTPSDY 109

  Fly    78 SIRAGS---SLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPP 139
            .:..|:   |:..:..::..|...|::|.|.......|:|:|||:||:::::.|  :|:.   .|
 Frog   110 QVLLGAYQLSVASASELLSSVARVIVNPSFTIPGGPGDIALLKLTSPVAYTEYI--LPVC---VP 169

  Fly   140 TSSSAL-------ATGWGR-GNFLIRPRQLQGVEILIRPLI---VCKLKY--GNGVFN------- 184
            :|:|..       .||||. |:.:..|.. |.::.::.|||   .|...|  .:|:.:       
 Frog   170 SSASGFYEGMQCWVTGWGNIGSAVTLPYP-QTLQQVMTPLISWSTCNQMYHVQSGISSNIAIVPK 233

  Fly   185 EDICAGRMG--KGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS--------SLYASVARYRNWI 239
            :.||||...  |..|.||||||||.  ||.|:..:.| ||..|.        .:|..|..:::|:
 Frog   234 DQICAGYAAGQKDSCQGDSGGPLVC--QLQGVWYQIG-IVSWGDGCAQASRPGVYTLVPNFKSWL 295

  Fly   240 LS 241
            .|
 Frog   296 SS 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 77/246 (31%)
LOC548809NP_001016055.2 Tryp_SPc 58..297 CDD:238113 77/247 (31%)

Return to query results.
Submit another query.