DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Tpsab1

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:268 Identity:90/268 - (33%)
Similarity:122/268 - (45%) Gaps:43/268 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLAVHLLISPV--VPVLLEPSERIIGGSSMDITDVPWQVSLQY---YGEHFCGGSIYSKTIIIT 67
            |||.:.||.|.|  .|.|..|.|.|:||........||||||:.   |..||||||:.....::|
  Rat    42 LLLTLPLLSSLVHAAPSLAMPREGIVGGQEASGNKWPWQVSLRVNDTYWMHFCGGSLIHPQWVLT 106

  Fly    68 AAHCI---KEGERSIRAGSS-----LHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSF 124
            ||||:   |.....:|....     .||.   ::.|...|.||.|.......|:|:|||::|::.
  Rat   107 AAHCVGPNKADPNKLRVQLRKQYLYYHDH---LLTVSQIISHPDFYIAQDGADIALLKLTNPVNI 168

  Fly   125 SDSIQTI---PLAETDPPTSSSALATGWGRGN---FLIRPRQLQGVEILIRPLIVCKLKYGNGVF 183
            :.::.|:   |.:||. |:.:....||||..|   .|..|..|:.|::.|....:|.|||..|:.
  Rat   169 TSNVHTVSLPPASETF-PSGTLCWVTGWGNINNDVSLPPPFPLEEVQVPIVENRLCDLKYHKGLN 232

  Fly   184 NED---------ICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS--------SLYAS 231
            ..|         :|||..|...|.||||||||..   |..|.....:|..|.        .:|..
  Rat   233 TGDNVHIVRDDMLCAGNEGHDSCQGDSGGPLVCK---VEDTWLQAGVVSWGEGCAQPNRPGIYTR 294

  Fly   232 VARYRNWI 239
            |..|.:||
  Rat   295 VTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 77/243 (32%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:238113 77/242 (32%)

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