DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and prtn3

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:242 Identity:76/242 - (31%)
Similarity:113/242 - (46%) Gaps:48/242 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKE----------GERSIRAGS 83
            :|:||........|:..|||..|.||||||:.:...::|||||::.          |..|:||..
 Frog    25 QIVGGREATPNSHPYIASLQLRGRHFCGGSLIAPQFLMTAAHCMENTASNLVTVVLGAHSLRANE 89

  Fly    84 SLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQ--TIPLAETDPPTSSSALA 146
            :......|     ..:....|:...::||:.:|||..|:|.:..:|  ::|.|..|.|..:..:.
 Frog    90 ATKQRFRV-----NQVFENGFNPLTLQNDIVILKLDRPVSLNGKVQVVSLPSANEDVPAGTQCVT 149

  Fly   147 TGWGR----GNFLIRPRQLQGVEI------LIRPLIVCKLKYGNGVFNEDICAGRMGKGGCYGDS 201
            .||||    |..   |.:||.:.:      |.||..:|     .|||.:.       .|.|:|||
 Frog   150 AGWGRLSTEGQI---PDRLQELNVTVTRQNLCRPNNIC-----TGVFMQQ-------AGICFGDS 199

  Fly   202 GGPLVFNGQLVGITS----RTGNIVCLGSSLYASVARYRNWILSAID 244
            |||||.||.:.||||    ..||.|.  ...::.|:.:|.:|..||:
 Frog   200 GGPLVCNGVIQGITSFIIRSCGNGVT--PDFFSRVSLFRRFIDDAIN 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 73/235 (31%)
Tryp_SPc 30..239 CDD:238113 73/234 (31%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 74/236 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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