DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and ctrl

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001004582.1 Gene:ctrl / 447843 ZFINID:ZDB-GENE-040912-147 Length:261 Species:Danio rerio


Alignment Length:253 Identity:87/253 - (34%)
Similarity:122/253 - (48%) Gaps:23/253 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CFHLLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQY-YGEHFCGGSIYSKTIIITA 68
            ||.|:.:......|.:..::....||:.|.:......|||||||. .|.||||||:.::..::||
Zfish     7 CFALVASTLGCGVPAIKPVISGYNRIVNGENAVSGSWPWQVSLQQSNGFHFCGGSLINQYWVVTA 71

  Fly    69 AHC-IKEGERSIRAGSSLHDSGGVVVGVEA-----YIIHPQFDKHNMENDVAVLKLSSPLSFSDS 127
            ||| ::.|...:..|.  ||.|.....|:.     .|.||.::..|..||:.:||||||...:..
Zfish    72 AHCRVQAGYHYVILGE--HDRGSSAESVQVKSIAKAITHPYYNSQNFNNDITLLKLSSPAQLTSR 134

  Fly   128 IQTIPLA--ETDPPTSSSALATGWGRGNFLIRPRQLQGVEILIRPLIVCKLKYG-NGVFNEDICA 189
            |..:.||  .|..|:.:..:.||||:......||.||...:.:.....||..:| |.:.:..|||
Zfish   135 ISPVCLAASSTSIPSGTRCVTTGWGKTGSTSSPRILQQTALPLLSPAQCKQYWGQNRITDAMICA 199

  Fly   190 GRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGSS--------LYASVARYRNWI 239
            |..|...|.||||||||....  |...:.| ||..|:|        :||.|:..|.||
Zfish   200 GASGVSSCQGDSGGPLVCESS--GAWYQVG-IVSWGTSDCNVRTPAVYARVSYLRQWI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 81/227 (36%)
ctrlNP_001004582.1 Tryp_SPc 32..257 CDD:238113 82/228 (36%)

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