DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG11842

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:251 Identity:70/251 - (27%)
Similarity:109/251 - (43%) Gaps:52/251 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IIGGSSMDITDVPWQVSLQYYGEH-----FCGGSIYSKTIIITAAHCIKEGERSI---RAG---- 82
            ||||......:.|....|.:..|:     ||||::.|...::|||||....:.|:   |.|    
  Fly    73 IIGGGPAVPKEFPHAARLGHKDENGEVEWFCGGTLISDRHVLTAAHCHYSPQGSVNIARLGDLEF 137

  Fly    83 -SSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSALA 146
             ::..|:......|:.:..||:|....:.||::|::||.|::|:|......|...|....:|.:|
  Fly   138 DTNNDDADPEDFDVKDFTAHPEFSYPAIYNDISVVRLSRPVTFNDYKHPACLPFDDGRLGTSFIA 202

  Fly   147 TGWGRGNFLIRP--RQLQGVEILIRPLIVCKLKYG---------NGVFNE------DICAG-RMG 193
            .|||:...:.|.  ::||.|::         ..||         |....|      .:|.| ...
  Fly   203 IGWGQLEIVPRTENKKLQKVKL---------YNYGTRCRITADRNDELPEGYNATTQLCIGSNEH 258

  Fly   194 KGGCYGDSGGP-LVFN------GQLVGITSRTGNIVCLGSSL---YASVARYRNWI 239
            |..|.|||||| |:::      ..::||||.  .:.|....|   |..|..|.:||
  Fly   259 KDTCNGDSGGPVLIYHMDYPCMYHVMGITSI--GVACDTPDLPAMYTRVHFYLDWI 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 68/249 (27%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 70/251 (28%)

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