DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and CG34129

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001036760.1 Gene:CG34129 / 43181 FlyBaseID:FBgn0083965 Length:314 Species:Drosophila melanogaster


Alignment Length:225 Identity:57/225 - (25%)
Similarity:93/225 - (41%) Gaps:45/225 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GEHFCGGSIYSKTIIITAAHCIKEGERSIRAGSSLHDSGGVVVGV-------EAY-----IIHPQ 103
            |...||.:.|:..::||:|:||.....|:        .|..|.|.       |.|     |..|:
  Fly    64 GNFACGAAYYAPLLVITSANCIYPYRNSL--------EGATVEGTAFSECDRENYADIDTIQFPE 120

  Fly   104 -FDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSALATGWGRGNFLIR-----PRQLQ 162
             |....:..||||::|..|:. ....:.|.|...........:..|||..|..:.     ||   
  Fly   121 KFIYQKLYMDVAVVRLRDPVR-GRLTEFIRLCSVKVQPKMQMVVFGWGFDNTEVEIPSSDPR--- 181

  Fly   163 GVEILIRPLIVCKLKYGN-GVFNEDICAGRMGKG--GCYGDSGGPLVFNGQLVGITSRTGNIVCL 224
            .|.:.|..:..|:.|:.: .:.:..||| |..|.  .|..|.|.||::..:|.|:.|...:  |:
  Fly   182 NVTVTIISIKECRQKFKSPKIASTSICA-RQPKNPKQCLYDGGSPLIYGRELCGVVSFGSH--CI 243

  Fly   225 GSS---LYASVARYRNWI------LSAIDV 245
            .:|   :|.::.|.:.:|      ::|.||
  Fly   244 DTSRPGMYTNIRRVKRFITETEESINAGDV 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 53/211 (25%)
CG34129NP_001036760.1 Tryp_SPc 39..261 CDD:473915 53/211 (25%)

Return to query results.
Submit another query.