DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG5255

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster


Alignment Length:257 Identity:77/257 - (29%)
Similarity:118/257 - (45%) Gaps:36/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLAVHLLISPVVPVLLEPSE----RIIGGSSMDITDVPWQVSLQYYGE--HFCGGSIYSKTIII 66
            :||.:.|..|.....:|.|.:    ||:||........|:|:|||..|.  |.|||:|..:..||
  Fly     4 ILLPLVLFTSSAASQILYPPQYTKNRIVGGEEAAAGLAPYQISLQGIGSGAHSCGGAIIDERWII 68

  Fly    67 TAAHCIKEGE----RSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDS 127
            |||||.:..:    |.:.....||.:|......:..:.|..:......||:|:|.|:..:.|.::
  Fly    69 TAAHCTRGRQATAFRVLTGTQDLHQNGSKYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNA 133

  Fly   128 IQTIPLAETDPPTSSSALATGWGR----GNFLIRPRQLQGVEILIRPLIVCKLKYGNG------- 181
            .|.:.|........|..|.||||.    |:.   |.:||.:|:...|...|:..:.|.       
  Fly   134 TQPVELDHEALVPGSRLLLTGWGTLSLGGDV---PARLQSLEVNYVPFEQCRAAHDNSTRVDIGH 195

  Fly   182 --VFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS--SLYASVARYRNWI 239
              .||:      .|:|.|:||||||||.||:||.:.:  ..:.|...  ..:||::.|.::|
  Fly   196 VCTFND------KGRGACHGDSGGPLVHNGKLVALVN--WGLPCAKGYPDAHASISYYHDFI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 70/230 (30%)
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 70/230 (30%)

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