DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG4053

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster


Alignment Length:222 Identity:70/222 - (31%)
Similarity:113/222 - (50%) Gaps:13/222 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQ-YYGEHFCGGSIYSKTIIITAAHCIK----EGERSIRAGSSLHDS 88
            ||:||...:....|:|||:| .:..|.|.|.|.::..|:||.||..    |..|.|...:...:.
  Fly    34 RIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDRLEP 98

  Fly    89 GGVVVGVEAYIIHPQFD-KHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSALATGWGRG 152
            |..:...|| ::|..:| .:...||:|::.::..:.|:|..|.:.|:...||..|:...||||..
  Fly    99 GQTLFPDEA-LVHCLYDIPYVYNNDIALIHVNESIIFNDRTQIVELSREQPPAGSTVTLTGWGAP 162

  Fly   153 NFLIRPRQ-LQGVEILIRPLIVCKLK--YGNGVFNEDICA-GRMGKGGCYGDSGGPLVFNGQLVG 213
            .......| ||.:.:.|.....|:.:  :.:|:....||. .|.|:|.|.|||||||::.|:|||
  Fly   163 ESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHICTFTREGEGACSGDSGGPLMWEGKLVG 227

  Fly   214 ITSRTGNIVCLG-SSLYASVARYRNWI 239
            :.: .|....:| ..:||:...|::||
  Fly   228 LVN-WGRACGVGMPDMYANTVYYQDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 68/220 (31%)
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 69/221 (31%)

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