DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG17475

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster


Alignment Length:281 Identity:78/281 - (27%)
Similarity:120/281 - (42%) Gaps:52/281 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CFHLLLAVHLL---------ISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQ-YYGEHFCGGSI 59
            |:..:.||.|.         ||....|..:  .|:|.|..:.:.:..:|:||| .||.|.|||.|
  Fly    18 CYKPISAVRLAQLSEDQLEWISKAEGVNFQ--NRVINGEDVQLGEAKYQISLQGMYGGHICGGCI 80

  Fly    60 YSKTIIITAAHCI---KEGERSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSP 121
            ..:..::|||||:   ......:..|:..::....|..||.:.||..::..:..||:|:::|:..
  Fly    81 IDERHVLTAAHCVYGYNPTYLRVITGTVEYEKPDAVYFVEEHWIHCNYNSPDYHNDIALIRLNDT 145

  Fly   122 LSFSDSIQTIPLAETDPPTSSSALATGWGRGNF------LIRPRQLQGV------EILIR----- 169
            :.|::..|...|........:..|.||||....      :::...|..|      ||:..     
  Fly   146 IKFNEYTQPAELPTAPVANGTQLLLTGWGSTELWGDTPDILQKAYLTHVVYSTCQEIMNNDPSNG 210

  Fly   170 PLIVCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLG-SSLYASVA 233
            |..:|.|..|             |:|.|:|||||||..||.|.|:.: .|....|| ...:|:|.
  Fly   211 PCHICTLTTG-------------GQGACHGDSGGPLTHNGVLYGLVN-WGYPCALGVPDSHANVY 261

  Fly   234 RYRNWILSAIDVLHFQAPATN 254
            .|..||.|.|     ..|.:|
  Fly   262 YYLEWIRSMI-----SGPCSN 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 65/231 (28%)
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 66/232 (28%)

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