DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG17477

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:255 Identity:76/255 - (29%)
Similarity:114/255 - (44%) Gaps:47/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQ-YYGEHFCGGSIYSKTIIITAAHCIK---E 74
            |:.|.:...||.....|:||.:....|.|:||||| ..|.|.|||:|.|...||||.||:|   .
  Fly    11 LVFSSLYCDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPT 75

  Fly    75 GERSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPP 139
            ....:..|:..:...|.|...:|..:|..:|....:||:.:|.|:..::|:...|.:.|..:..|
  Fly    76 SRLQVATGTIRYAEPGAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFP 140

  Fly   140 TSSSALA-TGWG----RGNFLIRPRQLQGV------------------EILIRPLIVCKLKYGNG 181
            ..:|.|. ||||    .|:.   |.|||.|                  ::.:.|..:|..:..| 
  Fly   141 RGASELVFTGWGSQSAAGSL---PSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQAN- 201

  Fly   182 VFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS--SLYASVARYRNWI 239
                        .|.|:||||||||..|.||||.:..  :.|...  .::.::..||:|:
  Fly   202 ------------IGACHGDSGGPLVHQGTLVGILNFF--VPCAQGVPDIFMNIMYYRDWM 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 71/238 (30%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 72/239 (30%)

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