DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and Sb

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster


Alignment Length:259 Identity:88/259 - (33%)
Similarity:122/259 - (47%) Gaps:41/259 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VPVLLEPSERIIGGSSMDITDVPWQVSLQ---YYG---EHFCGGSIYSKTIIITAAHCIKE---G 75
            ||.|..|..||:||.|......|||||::   ::|   .|.|||::.::..|.||.||:.:   .
  Fly   534 VPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLIS 598

  Fly    76 ERSIRAGSSLHDSGGVVV-------GVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPL 133
            :..||.|.  :|...|..       ||...::||::.....|.|:|::||..||.|:..:..|.|
  Fly   599 QIRIRVGE--YDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICL 661

  Fly   134 AETDP-PTSSSALATGWGR---GNFLIRPRQLQGVEILIRPLIVCK---LKYGNGVFNEDI--CA 189
            .|||. ....:|..|||||   |..|  |..||.|.:.|.....||   ::.|...|..||  ||
  Fly   662 PETDSLLIGMNATVTGWGRLSEGGTL--PSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCA 724

  Fly   190 G--RMGKGGCYGDSGGPLVFNGQ-----LVGITSRTGNIVCLGSSL---YASVARYRNWILSAI 243
            |  ..|:..|.|||||||....|     |.||.|  ..|.|..::|   ...::::..|||..:
  Fly   725 GYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIIS--WGIGCAEANLPGVCTRISKFTPWILEHV 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 81/244 (33%)
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 83/246 (34%)

Return to query results.
Submit another query.