DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and cfd

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_989320.1 Gene:cfd / 394945 XenbaseID:XB-GENE-973605 Length:265 Species:Xenopus tropicalis


Alignment Length:256 Identity:78/256 - (30%)
Similarity:118/256 - (46%) Gaps:30/256 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIK 73
            |||| :|:..|......|..||:||........|:..|:|..|.|.|||.:.:...:::||||..
 Frog     7 LLAV-VLVLTVATYECRPRGRILGGQDSKAEVRPYMASIQQNGIHQCGGVLIADKWVLSAAHCAT 70

  Fly    74 EGERS---IRAGS---SLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIP 132
            ....|   :..|:   |..:...:||.|...|.||.::.....:|:.:|:||..::.|.::..:|
 Frog    71 NSSNSSLNVMLGAISLSKPEKYKIVVKVLREIPHPLYNSTIKHHDLLLLELSEKVTLSPAVNPLP 135

  Fly   133 L--AETDPPTSSSALATGWGR----GNFLIRPRQLQGVEILIRPLI---VCKLK--YGNGVFNED 186
            .  ...|.......|..|||:    |.   :|..||.:.:   |||   ||..:  |.|.:....
 Frog   136 FQNENIDISAGKRCLVAGWGQMRLTGK---KPDTLQELWV---PLISRDVCNRRNYYDNEITANM 194

  Fly   187 ICAGRMGKGGCYGDSGGPLVFNGQLVGITS----RTGNIVCLGSSLYASVARYRNWILSAI 243
            ||||...|..|.||||||||.:|..|.|..    :.||....|  :|..:..|::||:.::
 Frog   195 ICAGESRKDSCEGDSGGPLVCDGIAVAIVQGGFRKCGNPTKPG--IYTLIEPYKSWIMESM 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 69/230 (30%)
cfdNP_989320.1 Tryp_SPc 27..251 CDD:238113 70/231 (30%)

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