DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and CG16998

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_648134.1 Gene:CG16998 / 38847 FlyBaseID:FBgn0035795 Length:258 Species:Drosophila melanogaster


Alignment Length:254 Identity:78/254 - (30%)
Similarity:123/254 - (48%) Gaps:24/254 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 HLLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHC 71
            ::|..:.|||.......|.|.|||:||..:.|...||..|:..:|.:.|..::.:...::||.||
  Fly     2 NILALILLLICGHKTSALSPQERIVGGVEVPIHLTPWLASITVHGNYSCSSALITSLWLVTAGHC 66

  Fly    72 IKEGER-SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAE 135
            ::..:. |:||||:..|.||....|.:.|:||.|:...:|||:|:|||....:...:||.:.|  
  Fly    67 VQYPDSYSVRAGSTFTDGGGQRRNVVSVILHPDFNLRTLENDIALLKLDKSFTLGGNIQVVKL-- 129

  Fly   136 TDPPTSS------SALATGWGRGNFL---IRPRQLQGVEILIRPLIVCKLKYGN---GVFNEDIC 188
               |..|      :.|..|||..:..   ..|| |:|..:.:....:|:..|.:   .:.::.:|
  Fly   130 ---PLPSLNILPRTLLVAGWGNPDATDSESEPR-LRGTVVKVINQRLCQRLYSHLHRPITDDMVC 190

  Fly   189 AGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLG---SSLYASVARYRNWILSAID 244
            |...|:..||||||.|||..|...||.|....  |..   ..:|..:|.|..||.:.::
  Fly   191 AAGAGRDHCYGDSGAPLVHRGSSYGIVSFAHG--CADPHFPGVYTRLANYVTWIFNVLE 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 69/225 (31%)
Tryp_SPc 30..239 CDD:238113 68/224 (30%)
CG16998NP_648134.1 Tryp_SPc 24..242 CDD:214473 69/225 (31%)
Tryp_SPc 25..242 CDD:238113 68/224 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.