DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and CG6592

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_648016.1 Gene:CG6592 / 38687 FlyBaseID:FBgn0035669 Length:438 Species:Drosophila melanogaster


Alignment Length:267 Identity:78/267 - (29%)
Similarity:128/267 - (47%) Gaps:45/267 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAVHLLISPVVPVLLEPS----ERIIGGSSMDITDVPWQVSL---QYYGEHFCGGSIYSKTIIIT 67
            |.::|..:|::..:|...    :||.||...:....|:||.:   :..|.::||||:.|...:||
  Fly    99 LVLNLETTPLMEKMLPEGAMAMDRIFGGDVGNPHCFPYQVGMLLQRPKGLYWCGGSLISDKHVIT 163

  Fly    68 AAHCIKEGERSI-----RAGSSLHDSGGV--VVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFS 125
            ||||:...:|::     ....:..:.|.|  :|..|.:.|:|.::...:::|:|:::|...:||:
  Fly   164 AAHCVDMAKRALVFLGANEIKNAKEKGQVRLMVPSENFQIYPTWNPKRLKDDIAIVRLPHAVSFN 228

  Fly   126 DSIQTIPLA----ETDPPTSSSALATGWGR---GNFLIRPRQLQGVEILIRPLIVCKLKYGNGVF 183
            :.|..|.|.    |.....:..|:|:||||   |...| ...|:.|::.|.....||..:.....
  Fly   229 ERIHPIQLPKRHYEYRSFKNKLAIASGWGRYATGVHAI-SNVLRYVQLQIIDGRTCKSNFPLSYR 292

  Fly   184 NEDIC-AGRMGKGGCYGDSGGPLVFNGQ------LVGITSRTGNIVCLGS---------SLYASV 232
            ..:|| :||..:..|.||||||||...:      ||||||       .||         :.:..|
  Fly   293 GTNICTSGRNARSTCNGDSGGPLVLQRRHSKKRVLVGITS-------FGSIYGCDRGYPAAFTKV 350

  Fly   233 ARYRNWI 239
            |.|.:||
  Fly   351 ASYLDWI 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 72/242 (30%)
CG6592NP_648016.1 Tryp_SPc 123..359 CDD:238113 73/243 (30%)

Return to query results.
Submit another query.