DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Tmprss4

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:231 Identity:76/231 - (32%)
Similarity:112/231 - (48%) Gaps:25/231 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKE----GERSIRAGSS-LHDS 88
            |::||........|||||:||..:|.|||||.....|:|||||.::    ....:||||: |.:|
  Rat   245 RVVGGVEASADSWPWQVSIQYNKQHVCGGSILDHHWILTAAHCFRKYLDVSSWKVRAGSNKLGNS 309

  Fly    89 GGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTI--PLAETDPPTSSSALATGWG- 150
            ..:.| .:.:|..|. .....|.|:|::||..||:||.|::.|  |.::.:...:......||| 
  Rat   310 PSLPV-AKIFIAEPN-PLQPKEKDIALVKLKMPLTFSGSVRPICLPFSDEELIPTMPVWVIGWGF 372

  Fly   151 ---RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDICAG--RMGKGGCYGDSGGPLVFN-- 208
               .|..:........|:::.......:..|...|....:|||  :.||..|.|||||||:::  
  Rat   373 TEENGGKMSDTLLQASVQVIDSARCNAEDAYQGEVTAGMLCAGTPQGGKDTCQGDSGGPLMYHYD 437

  Fly   209 -GQLVGITSRTGNIVCLGS----SLYASVARYRNWI 239
             .|:|||.|  ....| ||    .:|..|..|.:||
  Rat   438 KWQVVGIVS--WGYGC-GSPSTPGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 74/229 (32%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597
Tryp_SPc 245..470 CDD:214473 74/229 (32%)
Blue background indicates that the domain is not in the aligned region.

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