DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and CG17571

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001286096.1 Gene:CG17571 / 35409 FlyBaseID:FBgn0259998 Length:258 Species:Drosophila melanogaster


Alignment Length:255 Identity:96/255 - (37%)
Similarity:138/255 - (54%) Gaps:16/255 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLAVHLLISPVV-----PVLLEPSERIIGGSSMDITDVPWQVSLQ-YYGEHFCGGSIYSKTIII 66
            |||:|..|::...     |.|..|..||:.|..:||.:.|:|||:| ..|.||||||:.....::
  Fly     4 LLLSVVALVALAASCHGNPGLDFPFGRIVNGEDVDIENYPYQVSVQTTKGSHFCGGSLIDSETVL 68

  Fly    67 TAAHCIKE---GERSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSI 128
            |||||::.   .|..:|.||:...|||.||.|.|:..|..::...|.||||::|||||:..:..|
  Fly    69 TAAHCMQSYAASELQVRVGSTSRSSGGEVVTVRAFKYHEGYNSKLMINDVAIIKLSSPVRQTSKI 133

  Fly   129 QTIPLAETDPPTSSSALATGWGRGNFLI--RPRQLQGVEILIRPLIVC---KLKYG-NGVFNEDI 187
            :.|.||:::..:.::|:.:|||...||.  .|..||.||:.:.....|   ...|| :.:....:
  Fly   134 RAIELADSEAVSGTNAVVSGWGTTCFLFCSSPDTLQKVEVDLLHYKDCAADTYNYGSDSILETMV 198

  Fly   188 CAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLG-SSLYASVARYRNWILSAIDVL 246
            ||....|..|.||||||||.:.:|||:.|........| ..:||.||..|:||:...|.|
  Fly   199 CATGEKKDACQGDSGGPLVADNKLVGVVSWGSGCAWTGYPGVYADVASLRSWIVDTTDSL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 84/220 (38%)
Tryp_SPc 30..239 CDD:238113 83/219 (38%)
CG17571NP_001286096.1 Tryp_SPc 30..251 CDD:214473 84/220 (38%)
Tryp_SPc 31..254 CDD:238113 85/222 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443206
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BBP0
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 1 1.000 - - FOG0000678
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.