DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG1304

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_608418.1 Gene:CG1304 / 33074 FlyBaseID:FBgn0031141 Length:260 Species:Drosophila melanogaster


Alignment Length:262 Identity:101/262 - (38%)
Similarity:128/262 - (48%) Gaps:37/262 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FHLLLAVHLLISPVVPVLLEPSE---RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIIT 67
            |.||||        |||...|..   |::||........|.||||:..|.|.|||||.|:..::|
  Fly    13 FLLLLA--------VPVHSAPGSLNGRVVGGEDAVKNQFPHQVSLRNAGSHSCGGSILSRNYVLT 69

  Fly    68 AAHCIKE-----------GER-SIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSS 120
            ||||:..           .|| :|||||:...||||:|.|...|:|.::.  |..||||:|:|.|
  Fly    70 AAHCVTNQDSNGNSVPIAAERFTIRAGSNDRFSGGVLVQVAEVIVHEEYG--NFLNDVALLRLES 132

  Fly   121 PLSFSDSIQTIPLAETDPPTSSSALATGWGR----GNFLIRPRQLQGVEILIRPLIVCKLKYGNG 181
            ||..|.|||.|.|...|.|.....:.:||||    |:.   ||.||...:....|..|....|.|
  Fly   133 PLILSASIQPIDLPTADTPADVDVIISGWGRIKHQGDL---PRYLQYNTLKSISLERCDELIGWG 194

  Fly   182 VFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGSSL---YASVARYRNWILSAI 243
            |.:|.........|.|.||||||.|:|.|:||:.....: .| |:|.   ||.|..:..||.:..
  Fly   195 VQSELCLIHEADNGACNGDSGGPAVYNNQVVGVAGFVWS-AC-GTSYPDGYARVYYHNEWIKNNS 257

  Fly   244 DV 245
            ||
  Fly   258 DV 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 88/228 (39%)
CG1304NP_608418.1 Tryp_SPc 32..256 CDD:238113 89/230 (39%)

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