DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC3290448

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_321900.4 Gene:LOC3290448 / 3290448 VectorBaseID:AGAMI1_012340 Length:271 Species:Anopheles gambiae


Alignment Length:198 Identity:68/198 - (34%)
Similarity:107/198 - (54%) Gaps:13/198 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHC---IKEGERSIRAGSSLHDSGG 90
            ||:||..:.|...|:|:||:|.|.|.||.|..:..:.:||.||   ..|.:.::|.|||..:.||
Mosquito    34 RIVGGWEVYIGQFPYQLSLEYDGYHICGASAVAPRLALTAGHCCIGTNETDLTVRGGSSTLEEGG 98

  Fly    91 VVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTI-PLAETDPPTSSSALATGWG---- 150
            :|..|:..:|||.:|..|::.||.||::........:|..| |.:....|:...|:.||||    
Mosquito    99 IVFPVKKLVIHPDYDDSNLDFDVCVLRIGGTFQNKPNIGIIQPTSSGTIPSGELAIVTGWGATES 163

  Fly   151 RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNED--ICAGRMGKGGCYGDSGGPLVFNGQLVG 213
            .|||:   ..|:.:.:.:.....|..:..|.:.:..  :|||.:|:..|.||||||||::.:.:|
Mosquito   164 NGNFV---PNLRSLAVKVWSTKNCTDQAANYMTSSGSMMCAGSVGRSFCVGDSGGPLVYDQRQIG 225

  Fly   214 ITS 216
            |.|
Mosquito   226 IVS 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 68/198 (34%)
LOC3290448XP_321900.4 None

Return to query results.
Submit another query.