DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and LOC3290023

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_556332.4 Gene:LOC3290023 / 3290023 VectorBaseID:AGAMI1_005833 Length:297 Species:Anopheles gambiae


Alignment Length:260 Identity:71/260 - (27%)
Similarity:113/260 - (43%) Gaps:68/260 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SERIIGGSSMDITDVPWQVSLQYY---GEHFCGGSIYSKTIIITAAHCIKEGERSIRAGSSLHDS 88
            ::|::.|........|:||:|...   |...||||:.::..|:|||||:.       |.|:...|
Mosquito    54 TDRVVNGQEALPGQFPYQVALLLNFPDGTALCGGSVLTRNFILTAAHCVS-------ATSTTLVS 111

  Fly    89 GGVVV---------------------GVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIP 132
            ||:.:                     |:..   ||::|..::.||||::.|:||::|:..::.|.
Mosquito   112 GGIAIMGAHNRTAMELSQQRIRFTSTGIRR---HPEYDDTSLRNDVALILLNSPMTFTSRVKPIS 173

  Fly   133 L-AETDPPTSSSALAT--GWGRGN-----------FLIRPRQLQGVEILIRPLIVCKLKYGNGVF 183
            | |.||.........|  |:||.:           |...|         |.....|.:.:|..:.
Mosquito   174 LPARTDTRQFEGFTGTVSGFGRSSDASPYPSSILRFTSNP---------IMSKAECIVSWGFALA 229

  Fly   184 -NEDIC---AGRMGKGGCYGDSGGPLVFN--GQL-VGITSRTGNIVCLGS--SLYASVARYRNWI 239
             ::::|   .|  |:..|.|||||||..|  |.| :|..|...:..|...  |:||.|:...:||
Mosquito   230 QSQNVCLKPTG--GRSSCNGDSGGPLTVNSGGVLQIGTVSFGSSYGCASGWPSVYARVSYVLSWI 292

  Fly   240  239
            Mosquito   293  292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 69/256 (27%)
LOC3290023XP_556332.4 None

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