DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and LOC3290022

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_556335.4 Gene:LOC3290022 / 3290022 VectorBaseID:AGAMI1_011283 Length:300 Species:Anopheles gambiae


Alignment Length:259 Identity:73/259 - (28%)
Similarity:118/259 - (45%) Gaps:55/259 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PSERIIGGSSMDITDVPWQVSL--QY-YGEHFCGGSIYSKTIIITAAHCIKEGERSIRAGSSLHD 87
            ||.||..|........|:|::|  :: .|...||||:.::..|:|||||:.       :|:|...
Mosquito    52 PSHRITNGQEATPGQFPFQIALISEFASGNGLCGGSVLTRNFILTAAHCVV-------SGASTLA 109

  Fly    88 SGGVVV---------------------GVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTI 131
            ||||.:                     |:..   ||.:....:.||:|.::|:||::|:..||.|
Mosquito   110 SGGVAIMGAHNRNVQESTQQRIRFATSGIRR---HPSYSSSTLRNDIATVRLNSPMTFTTRIQPI 171

  Fly   132 PL---AETDPPTSSSALATGWGRGNFLIRPRQLQGVEILIRPLIV---CKLKYGNGVFNEDIC-A 189
            .|   ::|......:...:|:||.:......... |.....|::.   |..::|:.|.|:.:| :
Mosquito   172 RLPGRSDTRQFGGFTGTVSGFGRTSDASSATSAV-VRFTTNPVMTNTDCIARWGSTVVNQHVCLS 235

  Fly   190 GRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS---------SLYASVARYRNWILSAID 244
            |..|:..|.|||||||....   |.|.:.| :|..||         |:||.|..:.:||::..|
Mosquito   236 GAGGRSSCNGDSGGPLTVQS---GGTMQIG-VVSFGSVNGCAIGMPSVYARVTFFLDWIVANSD 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 68/249 (27%)
LOC3290022XP_556335.4 None

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