DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG6048

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster


Alignment Length:272 Identity:70/272 - (25%)
Similarity:105/272 - (38%) Gaps:59/272 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 HLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQ-------YYGE-HFCGGSIYSKTIIITAA 69
            ||....:.|.......|||.|:...:.....||.::       ::|. |.||||:.....::|||
  Fly    29 HLDTKAIRPRFNADPGRIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAA 93

  Fly    70 HCIKEGERSIRAGSSLHDSGGVVVGVEAYII------------------------HPQFDKHNME 110
            ||..:        ..::|  |..|..|.:|:                        ..:||....:
  Fly    94 HCFVD--------QIIYD--GTFVPKEEFIVVMGNLDRYNRTNTLTFTIEERIMQLDKFDLSTYD 148

  Fly   111 NDVAVLKLSSPL-SFSDSIQTIPLAETDPPTSSSALATGWGRGNFLIRPRQLQGVEILIRPLI-- 172
            .|:|:|.|:..: :...:|:.|.|.....|.......||||..........|..|::   |:|  
  Fly   149 KDIALLMLNGTVPTGHPTIRPIALNRFAIPEGVVCQVTGWGNTEDGYVSDILMTVDV---PMISE 210

  Fly   173 ---VCKLKYGNGVFNEDICAGRM---GKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGSSL--- 228
               :.....|:.:....||||.:   .|..|.||||||||...:|.|:.|  ..|.|....|   
  Fly   211 EHCINDSDLGHLIQPGMICAGYLEVGEKDACAGDSGGPLVCQSELAGVVS--WGIQCALPRLPGV 273

  Fly   229 YASVARYRNWIL 240
            |..|:.|.:|||
  Fly   274 YTEVSYYYDWIL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 64/253 (25%)
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 64/253 (25%)

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