DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Prtn3

DIOPT Version :9

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_038934901.1 Gene:Prtn3 / 314615 RGDID:1304898 Length:422 Species:Rattus norvegicus


Alignment Length:254 Identity:74/254 - (29%)
Similarity:114/254 - (44%) Gaps:39/254 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPVVPVL---------LEPSERIIGGSSMDITDVPWQVSLQYY---GEHFCGGSIYSKTIIITAA 69
            ||.:|.|         ...:.:|:||........|:..|||..   |.|||||::.....::|||
  Rat   176 SPRLPCLRLAGVRFHGAVQASKIVGGHEARPHSRPYVASLQLSRSPGSHFCGGTLIHPRFVLTAA 240

  Fly    70 HCIKE-GERSIRAGSSLHDSGGVVVGVEAYIIHPQFD-KHNME---NDVAVLKLSSPLSFSDSIQ 129
            ||::: ..:.:......||........:.:.|...|: .:|.|   |||.:|:|:.|.|....:.
  Rat   241 HCLQDISWQLVTVVLGAHDLLSSEPEQQKFTITQVFENNYNPEETLNDVLLLQLNRPASLGKQVA 305

  Fly   130 TIPLAETDPPTS--SSALATGWGR-GNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDIC--A 189
            ...|.:.|...|  :..||.|||| |.....||.|..:.:.: ...:|:        ..::|  .
  Rat   306 VASLPQQDQSLSQGTQCLAMGWGRLGTRAPTPRVLHELNVTV-VTFLCR--------EHNVCTLV 361

  Fly   190 GRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGSSL-----YASVARYRNWILSAI 243
            .|...|.|:|||||||:.||.|.|:.|   .::...:||     :|.|:.|.|||.|.:
  Rat   362 PRRAAGICFGDSGGPLICNGILHGVDS---FVIRECASLQFPDFFARVSMYVNWIHSVL 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 67/227 (30%)
Tryp_SPc 30..239 CDD:238113 67/226 (30%)
Prtn3XP_038934901.1 Tryp_SPc 198..416 CDD:238113 69/229 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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