DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Ovch2

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:216 Identity:72/216 - (33%)
Similarity:103/216 - (47%) Gaps:34/216 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHC-----------IKEGERSIRAG 82
            ||:|||.::....||||||:...:|.|||:|.|...:||||||           :..||..:   
  Rat    51 RIVGGSQVEKGSYPWQVSLKQKQKHICGGTIISSQWVITAAHCMANRNIALTLNVTAGEHDL--- 112

  Fly    83 SSLHDSGGVVVGVEAYIIHPQFD-KHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSALA 146
             |..:.|...:.:|..||||||. |..|..|:|:||:.....|...::.:.|.|.....::..:.
  Rat   113 -SQAEPGEQTLAIETIIIHPQFSTKKPMNYDIALLKMVGTFQFGQFVRPVCLPEPGEQFNAGYIC 176

  Fly   147 T--GWGR---GNFLIRPRQLQGVEILIRPLIVCK---LKYGNGVFNED-ICAGRM--GKGGCYGD 200
            |  ||||   |..|  |:.||.|.:.|.....|:   |...|.:..:. :|.|..  |:..|.||
  Rat   177 TTAGWGRLSEGGSL--PQVLQQVNLPILTHEECEAVMLTLRNPITGKTFLCTGSPDGGRDACQGD 239

  Fly   201 SGGPLVFNGQ-----LVGITS 216
            |||.|:...:     |.|:||
  Rat   240 SGGSLMCQNRKGAWTLAGVTS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 72/216 (33%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 71/215 (33%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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