DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Prss42

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001100333.2 Gene:Prss42 / 301027 RGDID:1562548 Length:340 Species:Rattus norvegicus


Alignment Length:267 Identity:76/267 - (28%)
Similarity:119/267 - (44%) Gaps:72/267 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCI--------KEGERSI-R 80
            :|..:|:||...:....||||||:....|.||||:.:...::||||||        |.|:||: |
  Rat    79 QPLMKIMGGVDAEEGKWPWQVSLRVRHMHVCGGSLLNSQWVLTAAHCIHSRVQYNVKMGDRSVYR 143

  Fly    81 AGSSLHDSGGVVVGVEAYIIHPQFDKHN-MENDVAVLKLSSPLSFSDSIQTI--PLAETDPPTSS 142
            ..:||      |:.::...:||:|.... ::||:|:|||..|::|:.||..|  |.........:
  Rat   144 QNTSL------VIPIQNIFVHPKFSTTTVVQNDIALLKLQQPVNFTSSIHPICVPTGTFHVKAGT 202

  Fly   143 SALATGWGRG-------------------------NFLIRPRQLQGVEILIRPLIVCKLKYGNGV 182
            ....||||:.                         |.:::......|:::.|.: ||..|.|   
  Rat   203 KCWVTGWGKPDPGAPQIPTEILQEVDQSIILYEECNEMLKKMASTSVDLVKRGM-VCAYKEG--- 263

  Fly   183 FNEDICAGRMGKGGCYGDSGGPL--VFNGQLV--GITS------RTGNIVCLGSSLYASVARYRN 237
                      ||..|.|||||||  .|:.:.|  |:.|      |.|:     ..:|..||.|..
  Rat   264 ----------GKDACQGDSGGPLSCEFDNRWVQIGVVSWGIGCGRKGH-----PGVYTDVAFYNK 313

  Fly   238 WILSAID 244
            |:::.::
  Rat   314 WLITVVN 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 74/256 (29%)
Prss42NP_001100333.2 Tryp_SPc 84..315 CDD:238113 74/255 (29%)

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