DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Cela3b

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:273 Identity:81/273 - (29%)
Similarity:121/273 - (44%) Gaps:46/273 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CFHLLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGE----HFCGGSIYSKTII 65
            |..||:|   |.|........||.|::.|........||||||||..:    |.|||::.:...:
  Rat     6 CSLLLVA---LASGCGQPSYNPSSRVVNGEDAVPYSWPWQVSLQYEKDGSFHHTCGGTLIAPDWV 67

  Fly    66 ITAAHCIK----------EGERSIRAGSSLHDSGGVVVGVEA--YIIHPQFDKH--NMENDVAVL 116
            :||.|||.          |.||.:..|..      .|:.|.|  ..:||:::.:  :..||:|::
  Rat    68 MTAGHCISTSRTYQVVLGEFERGVEEGPE------QVIPVNAGDLFVHPKWNSNCVSCGNDIALV 126

  Fly   117 KLSSPLSFSDSIQ--TIPLAETDPPTSSSALATGWGR----GNFLIRPRQLQGVEILIRPLIVCK 175
            |||......|::|  .:|.|....|..:....:||||    |..   |.:||...:.:.....|.
  Rat   127 KLSRSAQLGDTVQLACLPPAGEILPNGAPCYISGWGRLSTNGPL---PDKLQQALLPVVDYAHCS 188

  Fly   176 L--KYGNGVFNEDICAGRMGKGGCYGDSGGPL---VFNG--QLVGITSRTGNIVC---LGSSLYA 230
            .  .:|..|....:|||...:.||.|||||||   ..||  |:.|:||...::.|   ...:::.
  Rat   189 KWDWWGFSVKKTMVCAGGDIQSGCNGDSGGPLNCPAENGTWQVHGVTSFVSSLGCNTLKKPTVFT 253

  Fly   231 SVARYRNWILSAI 243
            .|:.:..||...|
  Rat   254 RVSAFNEWIEETI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 70/243 (29%)
Cela3bNP_001100162.1 Tryp_SPc 28..265 CDD:238113 71/245 (29%)

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