DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Gzmm

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:185 Identity:56/185 - (30%)
Similarity:90/185 - (48%) Gaps:20/185 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERSIR---AGSSLHD--S 88
            :||||........|:.||||....|.|||.:..:..::|||||:.|..:.::   ...||||  .
  Rat    26 QIIGGREAVPHSRPYMVSLQNTKSHVCGGVLVHQKWVLTAAHCLSEPLQQLKLVFGLHSLHDPQD 90

  Fly    89 GGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQ--TIPLAETDPPTSSSALAT-GWG 150
            .|:...::..|.||.::. ..|||:|:|||...:..|.:::  .:|....|.|...|..:| |||
  Rat    91 PGLTFYIKQAIKHPGYNL-KYENDLALLKLDGRVKPSKNVKPLALPRKPRDKPAEGSRCSTAGWG 154

  Fly   151 ----RGNFLIRPRQLQGVEILIRPLIVC-KLKYGNGVFNED-IC--AGRMGKGGC 197
                ||..   .:.||.:::.:....:| ..::.|||..:. :|  ||..|:..|
  Rat   155 ITHQRGQL---AKSLQELDLRLLDTRMCNNSRFWNGVLTDSMLCLKAGAKGQAPC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 56/185 (30%)
GzmmXP_063119183.1 None

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