DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and 1810009J06Rikl

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:1810009J06Rikl / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:236 Identity:74/236 - (31%)
Similarity:120/236 - (50%) Gaps:17/236 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERSIR 80
            :...|.:.:...::|:||.:.....||:||||.....|.||||:.|...:::||||.|. :..:|
  Rat    10 LGAAVALPVNDDDKIVGGYTCPKHLVPYQVSLHDGISHQCGGSLISDQWVLSAAHCYKR-KLQVR 73

  Fly    81 AGS-SLH--DSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSS 142
            .|. ::|  :.|...:..|..|.||:::|..::||:.::||.||...:..:.|:.|..:...|.:
  Rat    74 LGEHNIHVLEGGEQFIDAEKIIRHPEYNKDTLDNDIMLIKLKSPAVLNSQVSTVSLPRSCASTDA 138

  Fly   143 SALATGWGR-----GNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDICAGRM--GKGGCYGD 200
            ..|.:|||.     |.:   |..||.:|..:.....||..|...:.:...|.|.:  ||..|.||
  Rat   139 QCLVSGWGNTVSIGGKY---PALLQCLEAPVLSASSCKKSYPGQITSNMFCLGFLEGGKDSCDGD 200

  Fly   201 SGGPLVFNGQLVGITSRTGNIVCLGS--SLYASVARYRNWI 239
            ||||:|.||::.||.| .|::..:..  .:|..|..|.:||
  Rat   201 SGGPVVCNGEIQGIVS-WGSVCAMRGKPGVYTKVCNYLSWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 71/221 (32%)
1810009J06RiklNP_775423.1 Tryp_SPc 24..243 CDD:238113 73/222 (33%)

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