DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and Prss3b

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_775150.1 Gene:Prss3b / 286911 RGDID:708437 Length:247 Species:Rattus norvegicus


Alignment Length:249 Identity:75/249 - (30%)
Similarity:121/249 - (48%) Gaps:22/249 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIK 73
            |:.:..|.:.|...|.:..::|:||.:.....:|:||||. .|.||||||:.:...:::||||.|
  Rat     4 LIFLAFLGAAVALPLDDDDDKIVGGYTCQKNSLPYQVSLN-AGYHFCGGSLINSQWVVSAAHCYK 67

  Fly    74 E------GERSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIP 132
            .      ||.:|    .:.:.|...:.....|.||.::.:..:||:.::||:||.:.:..:.|:.
  Rat    68 SRIQVRLGEHNI----DVVEGGEQFIDAAKIIRHPSYNANTFDNDIMLIKLNSPATLNSRVSTVS 128

  Fly   133 LAETDPPTSSSALATGWGR-----GNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDICAGRM 192
            |..:...:.:..|.:|||.     .|:   |..||.::..:.....||..|...:.:...|.|.:
  Rat   129 LPRSCGSSGTKCLVSGWGNTLSSGTNY---PSLLQCLDAPVLSDSSCKSSYPGKITSNMFCLGFL 190

  Fly   193 --GKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS-SLYASVARYRNWILSAI 243
              ||..|.||||||:|.||||.|:.|........|. .:|..|..|.|||...:
  Rat   191 EGGKDSCQGDSGGPVVCNGQLQGVVSWGYGCAQKGKPGVYTKVCNYVNWIQQTV 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 69/223 (31%)
Prss3bNP_775150.1 Tryp_SPc 25..243 CDD:238113 71/225 (32%)

Return to query results.
Submit another query.