DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Klkb1

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:256 Identity:86/256 - (33%)
Similarity:121/256 - (47%) Gaps:61/256 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQ---YYGEHFCGGSIYSKTIIITAAHCIKEGERSIRAGSSLHD--- 87
            ||:||::..:.:.|||||||   ....|.|||||..:..|:|||||..        |....|   
  Rat   390 RIVGGTNSSLGEWPWQVSLQVKLVSQNHMCGGSIIGRQWILTAAHCFD--------GIPYPDVWR 446

  Fly    88 -SGGVV-----------VGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPL-AETDPP 139
             .||::           ..::..|||.::.......|:|::||.:||::::..:.|.| ::.|..
  Rat   447 IYGGILNLSEITNKTPFSSIKELIIHQKYKMSEGSYDIALIKLQTPLNYTEFQKPICLPSKADTN 511

  Fly   140 T-SSSALATGWG----RGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNED-ICAGRMGKGG-- 196
            | .::...||||    ||.   ....||...|.:.|...|:.||.:.|..:. |||| ..:||  
  Rat   512 TIYTNCWVTGWGYTKERGE---TQNILQKATIPLVPNEECQKKYRDYVITKQMICAG-YKEGGID 572

  Fly   197 -CYGDSGGPLV--FNG--QLVGITS---------RTGNIVCLGSSLYASVARYRNWILSAI 243
             |.||||||||  .:|  |||||||         :.|        :|..||.|.:|||..|
  Rat   573 ACKGDSGGPLVCKHSGRWQLVGITSWGEGCARKEQPG--------VYTKVAEYIDWILEKI 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 82/250 (33%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 81/249 (33%)
Blue background indicates that the domain is not in the aligned region.

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