DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG30088

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:283 Identity:83/283 - (29%)
Similarity:114/283 - (40%) Gaps:73/283 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CFHLLL----AVHLLISPVVPVLLEP--SERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKT 63
            |..|:|    |.:.|| |...|..|.  :.||:.|....:...|:...|.|..|..|||:|.|..
  Fly    15 CVCLVLQEQVAANFLI-PSCGVSYESNVATRIVRGKEAMLKSAPFMAYLYYSSEIHCGGTIISSR 78

  Fly    64 IIITAAHCIKEGERSIRAGSSLHD-------SGG----------VVVGVEAYIIHPQFDKHNMEN 111
            .|:|||||::. ...:|.|.  ||       .||          :|:..:    :.:||:. :.|
  Fly    79 YILTAAHCMRP-YLKVRLGE--HDITRNPDCQGGSCSPPAEEFDIVLATK----YKRFDRF-LAN 135

  Fly   112 DVAVLKLSSPLSFSDSIQTI-----PLAETDPPTSSSALATGWGRGNFLIRPRQLQGV------- 164
            |:|:||||..:.|:..||.|     |.|   .|......|.|||:.........||..       
  Fly   136 DIALLKLSRNIRFNVHIQPICLILNPAA---APNVHEFQAFGWGQTETNHSANVLQTTVLTRYDN 197

  Fly   165 ----EILIRPLIVCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPLV----FNG-----QLVGITS 216
                .:|..|:.:           ..:|.|..|...|.||||||||    ::|     || ||.|
  Fly   198 RHCRSVLSMPITI-----------NQLCVGFQGSDTCSGDSGGPLVTKVNYDGVWRYLQL-GIVS 250

  Fly   217 RTGNIVCLGSSLYASVARYRNWI 239
             .|:..|....:|..|..|..||
  Fly   251 -FGDDKCQSPGVYTYVPNYIRWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 72/251 (29%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 73/252 (29%)

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