DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and Klk1b3

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_113711.1 Gene:Klk1b3 / 24594 RGDID:3175 Length:265 Species:Rattus norvegicus


Alignment Length:257 Identity:81/257 - (31%)
Similarity:122/257 - (47%) Gaps:34/257 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCI 72
            |.||:.|..:...|.:   ..|::||.:.::...||||::.|:||:.|||.:...:.:||||||.
  Rat    10 LFLALSLGRNDAAPPV---QSRVVGGYNCEMNSQPWQVAVYYFGEYLCGGVLIDPSWVITAAHCA 71

  Fly    73 KEGERSIRAGSSLHDSGGVVVG--VEAYIIHPQFDK-----HNME------NDVAVLKLSSPLSF 124
            .:..:.....::|::.......  |.....||.|::     |..:      ||:.:|.||.|...
  Rat    72 TDNYQVWLGRNNLYEDEPFAQHRLVSQSFPHPGFNQDLIWNHTRQPGDDYSNDLMLLHLSQPADI 136

  Fly   125 SDSIQTIPLAETDPPTSSSALATGWGRGNFLIRP------RQLQGVEILIRPLIVCKLKYGNGVF 183
            :|.::.|.|...:|...|:.||:|||.    |.|      ..||.|.|.:.....|...:...|.
  Rat   137 TDGVKVIDLPIEEPKVGSTCLASGWGS----ITPDGLELSDDLQCVNIDLLSNEKCVEAHKEEVT 197

  Fly   184 NEDICAGRM--GKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS----SLYASVARYRNWI 239
            :..:|||.|  ||..|.|||||||:.||.|.|||| .|...| |.    .:|..:.::..||
  Rat   198 DLMLCAGEMDGGKDTCKGDSGGPLICNGVLQGITS-WGFNPC-GEPKKPGIYTKLIKFTPWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 74/234 (32%)
Klk1b3NP_113711.1 Tryp_SPc 29..260 CDD:238113 75/235 (32%)

Return to query results.
Submit another query.