DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and F12

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_000496.2 Gene:F12 / 2161 HGNCID:3530 Length:615 Species:Homo sapiens


Alignment Length:258 Identity:65/258 - (25%)
Similarity:102/258 - (39%) Gaps:57/258 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERSIRAGSSLHDS 88
            |....|::||........|:..:| |:|..||.||:.:...::|||||:::..    |...|   
Human   367 LSSMTRVVGGLVALRGAHPYIAAL-YWGHSFCAGSLIAPCWVLTAAHCLQDRP----APEDL--- 423

  Fly    89 GGVVVG---------------VEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQT-------I 131
             .||:|               |.:|.:|..|...:.::|:|:|:|......|.::.:       :
Human   424 -TVVLGQERRNHSCEPCQTLAVRSYRLHEAFSPVSYQHDLALLRLQEDADGSCALLSPYVQPVCL 487

  Fly   132 PLAETDPPTSSSALATGWGR--------GNFLIRPRQLQGVEILIRPLIVCKLK--YGNGVFNED 186
            |.....|..::.....|||.        .:|      ||..::....|..|...  :|:.:....
Human   488 PSGAARPSETTLCQVAGWGHQFEGAEEYASF------LQEAQVPFLSLERCSAPDVHGSSILPGM 546

  Fly   187 ICAGRM--GKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLGS--------SLYASVARYRNWI 239
            :|||.:  |...|.||||||||...|..........|:..||        .:|..||.|..||
Human   547 LCAGFLEGGTDACQGDSGGPLVCEDQAAERRLTLQGIISWGSGCGDRNKPGVYTDVAYYLAWI 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 62/251 (25%)
F12NP_000496.2 FN2 41..88 CDD:128373
EGF_CA 96..131 CDD:238011
FN1 133..173 CDD:238018
EGF 178..206 CDD:394967
Kringle 217..295 CDD:395005
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..359
Tryp_SPc 373..612 CDD:238113 63/252 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.