DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and Tmprss2

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:268 Identity:89/268 - (33%)
Similarity:119/268 - (44%) Gaps:61/268 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERSIR-----AG------ 82
            ||:|||:....|.||||||...|.|.|||||.:...|:|||||::|...|.|     ||      
  Rat   253 RIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILKQSL 317

  Fly    83 ---SSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDP----PT 140
               .|.|.       ||..|.||.:|.....||:|::||.:||:|:|.::  |:...:|    ..
  Rat   318 MFYGSRHQ-------VEKVISHPNYDSKTKNNDIALMKLQTPLAFNDVVK--PVCLPNPGMMLDL 373

  Fly   141 SSSALATGWG----RG------NFLIRPRQLQGVEILIRPLIVCKLK--YGNGVFNEDICAGRM- 192
            :.....:|||    :|      |..:.|        ||.| ..|..|  |.|.:....||||.: 
  Rat   374 AQECWISGWGATYEKGKTSDVLNAAMVP--------LIEP-SKCNSKYIYNNLITPAMICAGFLQ 429

  Fly   193 -GKGGCYGDSGGPLVFNGQ----LVGITS-RTGNIVCLGSSLYASVARYRNWI------LSAIDV 245
             ....|.||||||||....    |:|.|| .:|........:|.:|..:.:||      :|.|..
  Rat   430 GSVDSCQGDSGGPLVTLKNEIWWLIGDTSWGSGCAKAYRPGVYGNVTVFTDWIYQQMRVISLIPG 494

  Fly   246 LHFQAPAT 253
            |....|.|
  Rat   495 LSMDCPWT 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 82/246 (33%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 83/248 (33%)
Blue background indicates that the domain is not in the aligned region.

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