DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG43335

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001247121.1 Gene:CG43335 / 12798413 FlyBaseID:FBgn0263040 Length:281 Species:Drosophila melanogaster


Alignment Length:274 Identity:90/274 - (32%)
Similarity:127/274 - (46%) Gaps:37/274 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSKCFHLLLAV---------HLLISPVVPVLLEPS---ERIIGGSSMDITDVPWQVSLQYYGEH 53
            |.|..|.::::|         ..|:.|...:...||   .||||||..:||..||...|.....:
  Fly     1 MKSAAFLVIISVCQWLCRFGESRLLEPNCGIRTMPSFHRTRIIGGSDAEITSHPWMAYLYNEFHY 65

  Fly    54 FCGGSIYSKTIIITAAHCIKEGER-SIR-AGSSLHDSGGVV--VGVEAY-----IIHPQFDKHNM 109
            ||.|::.:...::||||||:..:. ::| .||.|..|.|.:  :..|.|     |.|..|....|
  Fly    66 FCAGTLITNQFVLTAAHCIEASKNLTVRLGGSGLTRSDGSMCQITAEDYSVSMAIKHKYFTPSIM 130

  Fly   110 ENDVAVLKLSSPLSFSDSIQTIPLAETDPPT------SSSALATGWGRGNFLIRPRQLQGVEILI 168
            .||:|:::|:..:.|.|.|:.|.:. .||..      ..:.:|||||..:..:.|..||...|.:
  Fly   131 LNDIAMIRLARTVKFYDHIRPICII-LDPAVRLLLEDGMTLMATGWGLADKRMHPHLLQEAPITV 194

  Fly   169 RPLIVCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPL--VFN--GQL----VGITSRTGNIVCLG 225
            ....||...|...:....||||......|.|||||||  |.|  |.|    .|||| .|:|.|..
  Fly   195 MNRNVCSKLYDVAITQGQICAGDKETNTCLGDSGGPLGGVVNYYGDLRFVQYGITS-FGDIECRS 258

  Fly   226 SSLYASVARYRNWI 239
            .|:|..::.|..||
  Fly   259 PSIYTDLSTYSGWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 80/232 (34%)
CG43335NP_001247121.1 Tryp_SPc 42..275 CDD:238113 81/233 (35%)

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