DRSC/TRiP Functional Genomics Resources

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Protein Alignment Send1 and CG43110

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster


Alignment Length:242 Identity:73/242 - (30%)
Similarity:102/242 - (42%) Gaps:39/242 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PSERIIGGSSMDITDVPWQVSLQYYGEHF------CGGSIYSKTIIITAAHCIKEGERSIRAGSS 84
            |..:||.||:..      |.|.||....|      |||:|..:..::|.|||.......:|.|:.
  Fly    32 PVPKIISGSNAS------QQSAQYMAGIFNTTHLLCGGTIIHEDFVLTVAHCKSTQTLFVRLGAY 90

  Fly    85 LHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPPTSSSAL---A 146
            ..:.....:.|...|.|||:......||:|::||...:.|:.:||.|.: ..|........   |
  Fly    91 NINHPTDQIRVIETIAHPQYSNSTYANDIALVKLERSVIFNLNIQPICI-HLDATLGKQIRYYNA 154

  Fly   147 TGWGRGNFLIRPRQLQGVEILIRPLI------VCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPL 205
            .|||      |.|..:..:||.|..:      :|.|..|.....:.|||.......|.|||||||
  Fly   155 FGWG------RTRNAEQSDILQRIFVNRTNPMICHLYLGMSPDPKQICATTDQGDTCAGDSGGPL 213

  Fly   206 V---------FNGQLVGITSRTGNIVCLGSSLYASVARYRNWILSAI 243
            :         |:.|. |||| .|...|.|..||..|::|..||.:.:
  Fly   214 ISKITYQGKNFDTQF-GITS-YGTRECNGVGLYTDVSQYSGWIANIV 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 70/233 (30%)
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 72/235 (31%)

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