DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC1279386

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_319102.5 Gene:LOC1279386 / 1279386 VectorBaseID:AGAMI1_005107 Length:282 Species:Anopheles gambiae


Alignment Length:236 Identity:91/236 - (38%)
Similarity:116/236 - (49%) Gaps:34/236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHC---IKEGERSIRAGSSLHDSG 89
            |||:||..:||.|.|:||||: .|.|||||||.....|:|||||   |......|..|||..:.|
Mosquito    38 ERIVGGVPVDIRDYPYQVSLR-RGRHFCGGSIIDSQWILTAAHCTRTINARNLWIHVGSSHVNDG 101

  Fly    90 GVVVGVEAYIIHPQFDKHN--MENDVAVLKLSSPLSFSDSIQTIPLAE--TDPPTSSSALAT--- 147
            |..|.|...:.||   |.|  .:.|.::|.|..||:.|:|:|.|||.:  ...||...:..|   
Mosquito   102 GESVRVRRILHHP---KQNSWSDYDFSLLHLDQPLNLSESVQPIPLRKPSASEPTGELSDGTLCK 163

  Fly   148 --GWGRGNFLIRPRQLQGVEILIRPLIV-------CKLKY-GNGVFNED-ICAG--RMGKGGCYG 199
              |||..:   .|.:   ..:::|...|       |...| |.|...|. ||||  ..||..|.|
Mosquito   164 VSGWGNTH---NPDE---SALVLRAATVPLTNHQRCSEVYEGIGSVTESMICAGYDEGGKDSCQG 222

  Fly   200 DSGGPLVFNGQLVGITSRTGNIVCLG-SSLYASVARYRNWI 239
            |||||||.:|||.|:.|........| ..:||.|:...:||
Mosquito   223 DSGGPLVCDGQLTGVVSWGKGCAEPGYPGVYAKVSTAYDWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 88/233 (38%)
LOC1279386XP_319102.5 None

Return to query results.
Submit another query.