DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC1274708

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_313869.6 Gene:LOC1274708 / 1274708 VectorBaseID:AGAMI1_014022 Length:327 Species:Anopheles gambiae


Alignment Length:236 Identity:74/236 - (31%)
Similarity:106/236 - (44%) Gaps:24/236 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERS-IRAGSSLHD----- 87
            ||:||....:...||...|||.|..:||||:.|...::|||||:....|: |......||     
Mosquito    82 RIVGGQETQVNQYPWMAMLQYSGTFYCGGSLISDRHVLTAAHCVHGFNRNKISVVLMEHDRVSTS 146

  Fly    88 -SGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAETDPP-TSSSALATGWG 150
             |..:|..|...|.|..::.:|..:|:|:|:|::.::..|.::.:.|.....| |....:.||||
Mosquito   147 ESMTMVSKVLRVIEHNGYNSNNYNSDIAILRLATVMTIEDKLRPVCLPTPKKPFTGYDGIVTGWG 211

  Fly   151 --RGNFLIRPRQLQGVEILIRPLIVC-KLKYG-NGVFNEDICAG--RMGKGGCYGDSGGPL-VFN 208
              ..|..| ...||.|.:.|.....| |..|| :.:.:..:|||  ...|..|.||||||| |..
Mosquito   212 ATSENGAI-STNLQEVTVPIMSNADCRKTGYGASRITDNMLCAGYDEGKKDSCQGDSGGPLHVIK 275

  Fly   209 GQLVGITSRTGNIVCLGS--------SLYASVARYRNWILS 241
            ........:...||..|.        .:|..|.|:..||.|
Mosquito   276 QNSTDNVHQIAGIVSWGEGCAKPNYPGVYTRVNRFGTWIRS 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 71/232 (31%)
LOC1274708XP_313869.6 None

Return to query results.
Submit another query.