DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Send1 and LOC1273529

DIOPT Version :10

Sequence 1:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster
Sequence 2:XP_312513.6 Gene:LOC1273529 / 1273529 VectorBaseID:AGAMI1_013020 Length:318 Species:Anopheles gambiae


Alignment Length:283 Identity:74/283 - (26%)
Similarity:120/283 - (42%) Gaps:73/283 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAVHLLISPVVPVLLE--PSERIIGGSSMDITDVPWQVSL--QY-YGEHFCGGSIYSKTIIITAA 69
            :..||.|:...|:..:  |:.||:.|........|:||:|  |: .|...||.||.::..::|||
Mosquito    46 IKAHLPINLRTPIATQNAPNRRIVNGQEARPGQFPYQVALLGQFNAGVGLCGASIITQRYVLTAA 110

  Fly    70 HCIKEGERSIRAGSSLHDSGGVVVGVEAYII-----------------HPQFDKHNMENDVAVLK 117
            ||:..|   :.|.:.: .:|..::|....:|                 ||.:|..::.||:||::
Mosquito   111 HCVYTG---VDASAPV-ANGTAILGAHNRMIEEPSQQRITFSSSGVIGHPGYDLFDVRNDIAVVR 171

  Fly   118 LSSPLSFSDSIQTIPL-AETDPPTSSSALATGWGRG-------------NFLIRPRQL------- 161
            |...:.::|.||.|.| :.:|..|.:..:.|..|.|             |:::.|...       
Mosquito   172 LDELIVYTDRIQPIRLPSRSDTRTFAGLMGTVSGYGIYSTANPALSDVLNYVLNPVMTNADCRAG 236

  Fly   162 -QGVEILIRPLIVCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPLVFNGQLVGITSRTGNIVCLG 225
             .|.|.||....:|:             :|..|:..|..||||||..  |..|.:.:.| :|..|
Mosquito   237 WSGFEWLIEAQNICQ-------------SGDGGRAACNSDSGGPLTV--QDSGESLQVG-VVSFG 285

  Fly   226 SS---------LYASVARYRNWI 239
            ||         ::|.|..|..||
Mosquito   286 SSGGCDNGVPTVFARVTYYLEWI 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 67/260 (26%)
LOC1273529XP_312513.6 None

Return to query results.
Submit another query.